|
|
||||||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Summerlin pulled two white mice from the container. While they wriggled and squeaked in protest, he inspected the sites of the black skin grafts. Impulsively, Summerlin took his felt-tipped pen out of the breast pocket of his white coat and applied it briefly to the grafted patches on the two white animals. The ink made them look darker. Then he replaced the mice in the bin and strode out ...
From The Patchwork Mouse, an account of William T. Summerlins 1974 false claim of skin transplantation without immunosuppression (1)
.
Fraud was so much simpler a generation ago. All one had to do was to take a felt-tipped pen and color a square patch of mouse skin. The incriminating patchwork was also easy to detect. Summerlins faked "transplants" were discovered by a laboratory assistant who washed off the black ink with a ball of cotton soaked in a little alcohol. Yet the scandal and its upshot in 1974 were just as great as those aroused by the more complex frauds of today. The patchwork incident was described by Jane Brody in The New York Times as "a medical Watergate" that reflected "dangerous trends in current efforts to gain scientific acclaim and funds for research." Indeed, Robert A. Good, Summerlins chief and co-author, was accused of "manipulating national attention and attracting an enormous amount of money for the institute." (2)
Soon afterward, Good stepped down as director of Sloan-Kettering, and that was the end of transplantation without immunosuppression. It sank without a trace in the literature: Summerlins fraudulent papers have been cited only 3 times in the past 25 years; each a refutation (3
, 4)
.
Korean stem cells
Nowadays it takes more than a lab assistant with a cotton swab to detect fraud. In 2005, Seoul National University appointed a broad committee to investigate Professor Hwang Woo-Suks claim that he had established 11 human embryonic stem cell lines by transfer of somatic cell nuclei (5)
. The team reported that "The data in the 2005 article including test results from DNA fingerprinting, photographs of teratoma, embryoid bodies, MHC-HLA isotype matches, and karyotyping have all been fabricated ... the research team of Professor Hwang does not possess patient-specific stem cell lines or any scientific bases for claiming having created one." (6)
To reach this conclusion, the committee collected cytogenetic samples, checked hundreds of DNA fingerprint samples, examined mitochondrial DNAs and compared dozens of polymorphic loci in the genes of alleged donors. Like Summerlins patchwork fraud, Dr. Hwangs fabrication was attributed to scientific pride and overreach. Richard Doerflinger, of the United States Conference of Catholic Bishops, told The New York Times that "Hype and ambition have gotten ahead of the science." (7)
Soon afterward, Dr. Hwang stepped down from directorship of his unit and that was the end of patient-specific stem cell lines in Seoul.
Remedies for fraud
The worldwide response to Dr. Hwangs fraud was as predictable as that to the patchwork mouse a generation ago: pious hand wringing and angry finger pointing. Now, as then, critics of science blamed the messenger (the journal) rather than the message (the fabrication). Bold changes were demanded in the way science gets written, reviewed, and published; and scientific editors scrambled to get out of the line of fire. But one might say that science journals already have a Sarbanes-Oxley code in place. Most journals already insist that all co-authors sign off on the final manuscript, some oblige each author to spell out his exact role, and others require each author to affirm the accuracy of every stage of the manuscript. Nevertheless, the editor of Cell suggests that it is time for the National Academy of Sciences to set strict new standards that apply to all (8)
. My colleague, Donald Kennedy of Science, observed that: "A journal cannot go into authors laboratories in search of fraud," but hedged his bet: "More actively, we are committed to examining our processes and ourselves in an effort to extract lessons for the future (9)
." The Journal of Cell Biology, which already has an elaborate digital process in operation to detecting image-fraud, now plans to erect a screen of algorithms designed to spot specific types of image manipulation. The software was developed under a grant from the FBI (9)
.
Patchwork data
To determine whether The FASEB Journal should turn to image scanning, algorithms for detecting statistical swindles, etc., Ive looked at recent cases of fraud and come up with some tentative conclusions:
1) Some scientists will cheat and well probably never know how often this happens. Young or old, MD or PhD, average or distinguished, male or female, black or white or khaki, some scientists will try to pull wool over the eyes of their colleagues, their reviewers, and their editors.
2) The culture of science is based on trust, not suspicion. Great scientists have had fraud committed under their noses, and good editors have published fabrication. Reviewers and editors must have a keen nose for swindle, but cannot engage in criminal investigation. As in political life, where I tend to side with liberty over security, in science, Id go for trust over suspicion every time.
3) Therefore, we ought not to rely on machines or algorithms of image or text analysis, but rely on the judgment of our editors, our editorial boards, and our reviewers as to whether a manuscript looks as if the data had been cooked.
4) No measure of "quality assurance", no affidavit of authorship, no oath of responsibility or percent effort can stop a soul hell-bent on self-destruction. And fraud in science, if not in politics, is always self-destructive. Since the name of the game is confirmation, science is self-cleansing: flawed work is soon forgotten and remains uncited.
Those conclusions are based in part on three recent illustrations of the swindlers art.
Cancer of the mouth
A study published by the Norwegian oncologist, Jon Sudbø, in The Lancet of October 15, 2005, concluded that long-term use of nonsteroidal antiinflammatory drugs could reduce the risk of oral cancer while exposing patients to higher risks of death from heart disease (10)
. Sudbøs fraud was exposed when Camilla Stoltenberg of the Norwegian Institute of Public Health, who had access to the primary data, discovered that of the 908 people in the study, 250 shared the same birthday! After Sudbø confessed to his action, an embarrassed spokesman for the hospital admitted that the data were "totally false, actually totally fabricated. His database had been completely fabricated on his computer" (11)
. The fraud led editors at The New England Journal of Medicine to look into two earlier papers by Sudbø and sure enough, the journal issued an "expression of concern" because two photomicrographs in a 2001 paper which purported to represent two different patients and stages of disease were in fact different magnifications of the same photomicrograph. Sudbø had patched histograms of ploidy to overlay his photomicrographs so that the ruse was not immediately evident (12
, 13)
. Keeping with The Lancets antifraud policy, Sudbøs paper not only affirmed that "JS, JJL, SML, and AJD (Sudbø and collaborators) contributed equally to this paper" but also detailed the part each author played in statistical analysis, cutting the sections, writing the paper, etc. Ironically, as required, the paper affirmed that "All authors approved the final report." Conclusion: So much for quality assurance forms. And as to image fraud, Michael Rossner of The Journal of Cell Biology, while arguing that "The goal of a journal editor should be to catch these things before publication if at all possible," admitted that his methods are not yet up to catching tricks of magnification like Sudbøs (13)
.
Immunologic tolerance
Luk van Parijs, a 35 year old "rising star" in the field of RNA interference (RNAi), was dismissed from MIT in November of 2005. After the whistle was blown by co-workers in his lab, Van Parijs confessed that he had fabricated data in grant applications, published papers, and in submitted manuscripts. Hed been hired by MIT on the basis of strong publications as a graduate student at the Harvard Medical School and a productive postdoc stint with David Baltimore at Cal Tech. Now much of his work is under scrutiny. David Baltimore, Cal Tech president, and no stranger to such matters, wired Science magazine: "I thought Luk was an excellent scientist and truly cannot understand why he would fake anything" (14)
. The New Scientist engaged experts to scrutinize two of van Parijss papers, one from Harvard, the other from Cal Tech. The issue remains contested by van Parijs (15)
. A 1998 paper in Immunity describes how Fas/FasL and Bcl-2, factors relevant to apoptosis, affect T cell responses to self- and non-self antigens. The New Scientist review concluded that "Fig. 1
of the paper contains 8 graphs ... Three graphs in the top row of the figure look very similar. Yet they are captioned as if they show data from three different mice ... In the bottom row, three graphs again look very similar. Yet they are again captioned as if they show data from three different mice." Worse yet was found in the Cal Tech paper: "two graphs in Fig. 1C
look very similar, especially if the graphs are printed out on transparent paper and superimposed. Yet one is captioned as if it comes from mouse cells infected with a human mutant gene, while the other is captioned as if it comes from mouse cells infected with a normal "wild type" human protein." (15)
. Conclusion: Even the best of senior scientists at Harvard and Cal Tech can have the wool pulled over their eyes, repeatedly.
|
Patching genes
In August of 1996, a reviewer for the British journal Oncogene found something strange on a submitted Western blot. The image accompanied a paper on cell transformation caused by a fusion protein coded by an abnormal chromosome associated with acute myeloid leukemia. Co-authors of the paper included the recently appointed director of the US National Center for Human Genome Research, Francis Collins, and a young MD-PhD candidate at Michigan, Amitav Hajra. When the anomaly was called to Collins attention, he immediately confronted the culprit. It was, Collins told Science magazine "one of those days youll never forget." (18)
Presented with evidence of a file of fraudulent data that Collins had unearthed, the student confessed. As the US Office of Research Integrity reported, Hajra fabricated data in "five published research papers, two published review articles, in one submitted but unpublished paper, in his doctoral dissertation, and in a submission to the GenBank database." (19)
Collins circulated an apology to his colleagues in the field, withdrew the offending publications, and the government eventually exerted sanctions against Hajra. The inquiry had started with that patched Western blot. The reviewer for Oncogene noted that two lanes in the Western blot, labeled as two different proteins had the same background artifacts. Collins explained to Science: "There is a lane in the upper left, which if you cut it about halfway down, and then took the lower half and turned it 180 degrees so that the bottom is now the top, you end up with something that looks like a lane in the lower right." Not easy to spot, but "absolutely unequivocal once you look," Collins explained. Conclusion: Its hard to see the mote your own eye, and it takes a sharp reviewer to cast it out.
Does fraud matter?
I checked out the citation record for one of the retracted Hajra and Collins papers. As published in Molecular and Cellular Biology, the experiments would have constituted a dramatic test of the oncogenic potential of the fusion protein (20). According to ISI, its been cited only 12 times since 1995 (20)
. As a random control, I looked up the citation record of the publication that immediately followed the Hajra and Collins opus in the same issue of the journal. The paper by Sonenbergs group at McGill, also describes a protein/protein interaction that controls nucleic acid function (21)
. That paper has been cited 276 times.
Conclusion
Science is self-cleansing, but check the Western blots.
FOOTNOTES
The opinions expressed in editorials, essays, letters to the editor, and other articles comprising the Up Front section are those of the authors and do not necessarily reflect the opinions of FASEB or its constituent societies. The FASEB Journal welcomes all points of view and many voices. We look forward to hearing these in the form of op-ed pieces and/or letters from its readers addressed to journals{at}faseb.org
REFERENCES
Related Articles
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |