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Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, USA
1Correspondence: Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109-0620, USA. E-mail: cooper{at}umich.edu
| ABSTRACT |
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Key Words: G0 G1 arrest G1 phase restriction point cell cycle quiescence
| INTRODUCTION |
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A recent example of the ubiquity of serum starvation and confluent growth arrest for synchronizing cells to analyze the cell cycle comes from experiments that analyzed the effect of Rho on the timing of expression of cyclin D1 in the G1 phase of the cell cycle (4)
. This article elicited a positive commentary in the same journal (5)
. Three different methods are described to analyze the events during the cell cycle. One method is described as follows: "In most experiments, confluent monolayers of NIH-3T3 cells or MEF were G0 synchronized by serum starvation for 1 and 2 days respectively in Dulbeccos modified Eagles medium (DMEM) with 1 mg ml-1 fatty acid free bovine serum albumin (BSA)." After this treatment, the cells were trypsinized and grown in DMEM with 10% fetal calf serum. Other methods used stimulation of quiescent cells by recombinant growth factors. We see in this experimental description the current standard approach to synchronization and arrest of cells in a proposed G0 state.
Why should the proposal of a restriction point, now more than a quarter of a century old, be reexamined and reappraised at this time? This experiment should be reexamined because it has so dominated thinking about the cell cycle. If there are problems or questions regarding such a fundamental result, then it is important to revisit the experiment to see whether our views of the restriction point proposal should be modified. Here I present a detailed reanalysis of the original serum starvation experiments that led to the restriction point proposal.
The analyses presented here will concentrate on the use of serum-starved or growth-arrested cells to produce a synchronized culture. The example quoted above is merely one of thousands of similar papers that use this approach. It is generally believed that the serum-starved cells are "arrested at a point in the G1 phase" or in a "G0 phase" and that upon stimulation to regrow, the stimulated cells move as a synchronized cohort through the cell cycle. I wish to take issue with this interpretation of starvation/release synchronization by looking at the archetypal experiment that defined this method, the postulation of the restriction point. Pardee proposed that during quiescence, irrespective of how quiescence is achieved, cells are arrested at a unique "restriction point" located within the G1 phase of the division cycle (1)
. Pardee further proposed the existence of a "single switching point, the restriction point (or R point) in G1, that regulates the reentry of a cell into a new round of the cell cycle."
The restriction point is one of many postulated G1 phase arrest points. The G0 phase (6)
is another well-known example. The G0 phase is a quiescent arrest state for mammalian cells where the cells are proposed to be "out of the cycle." G0 phase and the restriction point are operationally indistinguishable. However, a relationship between the G0 phase and the restriction point has been proposed. Zetterberg and Larsson (7)
suggested that the ability of the cell to enter the G0 state is determined by a cells temporal position relative to the restriction point when starvation or inhibition is imposed.
Cells arrested at the restriction point and cells in G0 arrest are examples of growth-arrested cells having a G1 phase amount of DNA. This common situation is usually referred to as arrest in G1 phase or G1 phase arrest.
Here we consider all G1 phase arrest proposals as common phenomena. An analysis of one G1 phase arrest proposal can be directly applied to other G1 phase arrest proposals, irrespective of the arrest conditions or cells studied. An alternative view of the cell cycle presented below suggests that the restriction point does not exist, the G0 phase does not exist, and one should not even use the locution "arrest in G1 phase" to describe cells that are merely "arrested with a G1 phase amount of DNA."
| THE ORIGIN OF THE RESTRICTION POINT |
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Additional experiments with sequential applications of different starvation regimens supported the notion of a unique restriction point. No sequence of different growth arrest conditions allowed cells to escape inhibition and enter S phase. If there were different arrest points for different starvation conditions, then initial arrest at a point later in the cell cycle, followed by relief of this arrest and arrest with a condition causing arrest earlier in the cell cycle, would let cells proceed to the initiation of S phase. No escape from inhibition as indicated by DNA synthesis was observed for any combination of arrest sequences. Pardee concluded that there was a single, unique arrest point for different arrest protocols. Pardee termed this point the "restriction point."
The conclusion from the timing experiment, however, was tempered and restrained by the fact that not all cells initiated DNA synthesis at the same time upon release from starvation. As Pardee pointed out (1)
in the original restriction point paper, "... different cells begin thymidine incorporation at different times. Thus, measurement of the time of initiation of DNA synthesis by a cell population depends upon the behavior of an early initiating subclass of the population. We can only conclude, therefore, that this subclass is at the same point in different quiescent cultures."
If there were a "restriction point" and if cells were arrested at a unique point in the G1 phase, then the population of arrested and subsequently released cells would be expected to proceed toward S phase in a relatively synchronous manner. This synchronous entry into S phase is not observed. Entry into S phase is asynchronous as indicated by the initial results of Pardee as well as by subsequent experiments on serum starvation and release (see refs 8
9
10
).
Thus, the original experiments of Pardee do not support the proposed restriction point. As cells do not form a synchronized cohort upon release from the arrest conditions, one could conclude that a restriction point does not exist at a particular time during the G1 phase of the eukaryotic cell cycle.
The sequential starvation results are vitiated by the suggestion that the three starvation protocols all lead to a cessation of mass growth. Exchanging one mode of growth inhibition for another mode of growth inhibition should merely lead to the observed inhibition of initiation of DNA synthesis. Thus, if inhibition of protein synthesis, a process that occurs continuously throughout the cell cycle, leads to arrest of initiation of DNA replication, then replacing one method of protein synthesis inhibition with another method of protein synthesis inhibition would merely lead to a continuous inhibition of protein synthesis.
| RELATIONSHIP OF THE RESTRICTION POINT AND G0 |
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Illustrations of these two different views of G1 phase arrest are presented in Fig. 1
. The restriction point and G1 phase arrest points are viewed as points within the G1 phase at which cells come to rest. The restriction point may be imagined as representing some function a cell must perform as it passes through the G1 phase of the division cycle. Upon growth arrest, cells in all phases of the division cycle accumulate "at the restriction point" (Fig. 1a
). The idea of pattern in Fig. 1a
is that if cells are truly arrested at a point in the division cycle, the aligned cells should be synchronized when starvation ceases and growth resumes.
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Figure 1b
illustrates arrest with a G1 phase amount of DNA except that the arrested cells are "out of the cycle." It is not possible to operationally distinguish cells at the restriction point from G0 phase cells by merely studying the DNA contents of arrested cells. Both arrested cell types have a G1 phase amount of DNA and are operationally indistinguishable.
Pardee did not explicitly discuss cell synchronization when the restriction point was proposed. However, this idea has spread from researcher to researcher until there are literally hundreds, and possibly thousands, of papers that propose cell synchronization by cell arrest at a particular G1 phase arrest point. The proposal of a restriction point was thus applied willy-nilly to any starvation protocol where the fraction of cells with a G1 phase amount of DNA increased. It was assumed that upon release from G1 phase or restriction point arrest, the cells would be synchronized.
One of the most popular synchronization methods is to starve cells of serum for extended periods, then restore serum to produce a presumably "synchronized" culture. Sometimes the arrest point is formulated as "G1/G0." Other times the cells are explicitly described as arrested at the restriction point. Irrespective of what they are called (G1 phase arrest, G0, quiescence, arrest at a restriction point), all the arrest conditions may be considered similar phenomena.
| AN ALTERNATIVE VIEW OF ARREST WITH G1 PHASE AMOUNT OF DNA |
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It is interesting to ask, what is the evidence for the statement, made above, that the cells are arrayed sequentially reflecting their original order at starvation? This is the essence of the problem. The continuum model of the cell cycle asks, what is the evidence that they are not so arrayed, and rather are arrested at a particular point? The model given in Fig. 1c
is a counter-explanation that has not been taken into account to explain arrest of cells with a G1 phase amount of DNA without the need to invoke G1 phase-specific events. Two pieces of evidence support the proposal that cells are not arrested at a point. The first is the fact of G1 phase arrest. The continuum model predicts this as well as the G1-control model or restriction point model. But when cells are released, the continuum model predicts that cells will not be synchronized. Thus, the original evidence from the Pardee restriction point experiment actually favors the continuum model.
The incorrect interpretation of evidence for the restriction point does not automatically mean that the continuum model is correct. The continuum model is presented as a framework within which to reexamine the restriction point proposal and to see where there are problems.
The restriction point has also been described as a point determining when cells become independent of outside stimuli for division. As recently summarized (2)
, "After the cell has advanced two-thirds of the way through G1, the cell may decide to commit itself, essentially irrevocably, to continue its advance and complete its cell cycle." Cells past the restriction point are committed to entering S phase whereas cells before the restriction point have not yet made that commitment.
The alternative view of the cell cycle (Fig. 1c
) proposes that leakage can account for the differences between cells in the early and late parts of the G1 phase. If starvation is not perfect and absolute, but some leakage occurs, cells slowly accumulate material leading to an initiation of S phase even during the period of incubation in low serum. Cells closer to initiation (i.e., later in S phase) will reach initiation mass sooner than cells earlier in the G1 phase. Cells later in the G1 phase at the time growth arrest is imposed are less likely to have a delayed cell division in the Zetterberg-Larsson experiment. Cells earlier in the cycle will not accrue enough leakage to initiate DNA synthesis and thus will exhibit a delayed cell division.
| THE BACTERIAL RESTRICTION POINT |
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From simplicity, parsimony, or Occams razor considerations alone, I suggest that pattern c in Fig. 1
is the preferred explanation of arrest with a G1 phase amount of DNA. The support of pattern c by experimental results merely adds to the strength of this conceptual analysis.
| RETHINKING G0 |
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An alternative view of the G0 phenomenon related to differentiation is illustrated in Fig. 2
. Growth arrest is not necessary to have cells look as though they are in G0. Chemical changes may occur at slower growth, but these changes are not necessarily related to the cell cycle. If growth slows so cells have a long interdivision time, it will appear that cells have a G1 phase amount of DNA (Fig. 2)
. But these cells are not arrested at any point in the cell cycle. The increase in G1 phase cells is due to the relative invariance of S and G2/M phases (17
, 18)
. The increased interdivision time is accommodated by a substantially elongated G1 phase (12
, 18
, 19)
. Slow-growing cells may have a very long or even an infinite interdivision time. The cells with an infinite interdivision time are cells that do not divide. It should not be assumed that simply because the cells exhibit a preponderance of G1 phase DNA contents that the cells are arrested at a particular point in the cell cycle or that the cells are in an "out of phase" condition such as G0. As cells go from fast growth (Fig. 2a
) to slow growth (Fig. 2b, c
), it appears that cells enter a G1 phase arrest state. But as drawn here, the cells are not necessarily arrested at any particular point, either within or without the cell cycle.
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If cells alter their biochemistry due to slow-growth conditions, then one may associate biochemical changes with the increase in G1 phase cells. But this association may just be fortuitous (20)
. Starvation or arrest conditions may elicit biochemical changes in cells as the cells cope with starvation stress or the cells differentiate. But one must not conflate or confuse these two independent phenomena. Cells may differentiate and may grow slowly and increase the G1 phase cells. However, these two independent phenomena do not prove the existence of any particular G1 phase arrest point or restriction point (20)
.
The proposal made here accepts that differentiated cells may never divide again. There very likely are such cells (e.g., nerve and brain cells), and such cells may all have a G1 phase amount of DNA. This combination of G1 phase DNA content and different cellular chemistry has been used to argue there is a unique and definable G0 state. What is argued here is that simply because cells accumulate in a uniform state of DNA content and exhibit biochemical changes does not mean that these two results are causally associated.
It is important to understand the verbal implications of the term "G0." G0 arose to define a state "before G1." Cells enter G0 from a point "in G1 phase." Upon release from G0, cells reenter the cell cycle "in G1 phase." These two suggestions support the proposal that there exist G1 phase events or decision points. If cells were described as being in an "X" state, with a name unrelated to the cell cycle, then there would be less argument over whether there is a G0 (or X) state. The proposed existence of G0 and its relationship to the G1 phaseas evidenced by all G0 cells having a G1 phase amount of DNAis implicit support for the existence of G1 phase events. It is this support for G1 phase events that is dismissed here.
One may attach any label to a particular collection of cells but it is confusing, with unwanted and unnecessary baggage, to call such cells G0 cells, implying that such arrested cells are related in some way to arrest at a point in the cell cycle.
| ON THE EXISTENCE OF G1 PHASE EVENTS |
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It is important to realize that essentially all of the proposed G1 phase phenomena are based on experiments using arrest or inhibition methods to produce a population of cells "arrested in G1 phase" or a "synchronized culture" from such cells. The arguments presented here indicate the problem with this approach. If the cells are not arrested at a particular point in G1 phase and are not synchronized, then cell cycle phenomena identified using such cells are not necessarily related to the cell cycle (21)
.
Until a particular G1 phase phenomenon (for example, expression of a particular cyclin in the G1 phase of mammalian cells) is reproducibly studied and analyzed and rendered a reproducible phenomenon similar to the ß-galactosidase of Escherichia coli, one does not have to accept the weak evidence in support of such phase-specific phenomena (22)
. For example, cyclin expression in the G1 phase of mammalian cells rests almost entirely on homology with fungi or lower invertebrates. Direct physiological evidence in mammalian cells that G1 phase cyclins actually vary in expression during the normal, unperturbed division cycle is sorely lacking. There is no mammalian cell system studied in numerous laboratories where the cyclins are analyzed and their rate of synthesis during the division cycle pinned down so that it is irrefutable that cyclin expression is taking place specifically in the G1 phase. Most important, much of the data proposing the existence of G1 phase events are based on methods subject to the introduction of artifacts where artificial periodicities may be introduced by the methodology (8
, 21
, 23
24
25)
.
An instructive example of the introduction of artifacts by the use of growth-arrested cells comes in the study of c-myc expression during the cell cycle. The original proposal that c-myc was expressed specifically in G1 phase (26
, 27)
was shown to be incorrect when growing cells were studied (28
, 29)
. A reinterpretation of these experiments in terms of the continuum model has been published (21)
.
| ON THE EXISTENCE OF "OVERWHELMING" EVIDENCE FOR G1 PHASE EVENTS |
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| EXPERIMENTAL SUPPORTS FOR THE ALTERNATIVE MODEL |
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Recent results from my laboratory support the proposed alternative view of the cell cycle and the critique of G1 phase arrest points presented above. For example, I have studied the classical G1 phase phosphorylation of retinoblastoma protein. Retinoblastoma protein phosphorylation in G1 phase is as close as one could come to an accepted cell cycle phenomenon that is widely studied and reproducibly reported to exist. Yet our studies show that in some cells there is no G1 phase phosphorylation event, as cells are phosphorylated at all times during the division cycle (24)
. Even more to the point, our results explain why many researchers have come to think there is a G1 phase phosphorylation event when the results are merely due to cells not being grown at a low enough cell density (13
, 25)
. To briefly summarize the experimental evidence for an alternative view of G1 phase Rb phosphorylation, if one grows cells to different levels of confluence (from 100% down to 5%), there is a continuous variation in the degree of phosphorylation, with low density cells having 100% Rb phosphorylated. This result is interpreted as indicating that cells at even moderate levels of confluence (e.g., 50% confluence) are a mixed culture of arrested cells (cells in groups are proposed to be arrested by some sort of contact inhibition) and cells that are freely growing. The arrested cells have dephosphorylated Rb and have a G1 phase amount of DNA (by the analysis presented above); the growing cells have phosphorylated Rb and cells in all phases of the cell cycle. Looking only at the G1 phase cells in this mixed population reveals that phosphorylated and dephosphorylated Rb is found. This finding has been interpreted as supporting a mid-G1 phase phosphorylation of Rb protein. The alternative explanation, that growing cells have Rb phosphorylated throughout the cell cycle, and nongrowing cells have dephosphorylated Rb protein, adequately explains the data on Rb phosphorylation. An experimental (24)
analysis as well as a review (25)
should be consulted for the details of this analysis.
In addition, we have reanalyzed a recent paper that proposed numerous cell cycle-specific syntheses (30)
and have shown that the data are neither reproducible nor supportive of cell cycle events (31)
. Finally, time lapse videographic studies of starvation and inhibition synchronization methods indicate that the cells produced by this type of manipulations (e.g., lovastatin inhibition) are not synchronized (32)
. Together, these results support the alternative view of the cell cycle (13)
. Other experimental support of the alternative model has been summarized (13)
.
The conclusion of this analysis of the restriction point is that even this forerunner of all G1 phase arrest points did not lead to a synchronized culture, either in the original work as measured by the initiation of DNA synthesis or in later work looking at cell division. Thus, the restriction point is another example of arrest "with a G1 phase amount of DNA" where the cells are not synchronized.
| THE CONTINUUM MODEL |
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Although the analysis presented here has been directed primarily at the phraseology "the restriction point," the results apply to other formulations of G1 arrest such as G1 arrest, entry of cells into G0, and quiescent states where cells accumulate an excess of cells with a G1 phase amount of DNA. Many of these proposals have been addressed in previous publications (8
, 13
, 23)
.
| APPLICATION OF THESE IDEAS TO THE RHO/CYCLIN D1 KINETICS |
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| BIOCHEMISTRY OF PROPOSED RESTRICTION POINT ELEMENTS |
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One candidate for the R-protein is cyclin D. I will not review the evidence for or against this proposal. Here I just wish to emphasize that simply because various molecules have been identified as important regulators for passage of the cell through the cell cycle does not imply that the existence of this molecule is support for the existence of the restriction point. One can have cyclin D1 as an important regulator of cell growth throughout the cell cycle. Interfering with cyclin D1 synthesis or activity would lead to the arrest of a cell culture with a G1 phase amount of DNA. But it is not logical to conclude this means that the existence of cyclin D1 supports the restriction point idea. The restriction point proposal must stand on its own. The question raised here is, was the original postulation of a G1 phase restriction point correct or not?
| ON THE ATTRACTION OF G1 PHASE EVENTS |
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One answer is that the idea of arrest points has been useful to some researchers. The shorthand of arresting cells at a restriction point (rather than describing growth conditions, time of treatment, and so forth in detail and leaving the interpretation of the observations for a separate treatment) allows a field to communicate ideas. Phrases such as "G0" and "restriction point" are simple shorthand for experimental treatments that produce a type of cell collection. But because something is useful does not mean it is true. Utility and consensus should not lead to the conclusion that near-universal acceptance ensures that a phenomenon exists. Until the arguments presented in this paper are dealt with, we must be skeptical of the existence of restriction points and other related G1 phase phenomena.
It is important to distinguish the utility in facilitating communication from utility in understanding a biological phenomenon. The use of the terms restriction point and G0 to describe cell cycle controls may actually prevent one from seeing the underlying biological controls. Thus, the shorthand terms for control systems may be anti-utilitarian.
Besides utility, structural aspects of the development of a scientific field make it difficult for workers to discard ideas held by the majority of the field. Because of the repeated use of the terms "restriction point," "G0," and "G1 phase arrest" by investigators of cell cycle studies, it becomes difficult to avoid using these terms even when they are not necessary for a particular analysis.
Furthermore, new researchers entering the field see these terms in textbooks and assume that these words describe a reality that can be used in discussions of the cell cycle. It is rare that a researcher goes back to old work (e.g., 29 years old) and checks to see whether the experiments have an alternative explanation. The historical development of a field leaves certain ideas ingrained in the development of the field and it becomes difficult to discuss ideas outside of the consensus view of the field.
What about the hundreds, if not thousands, of papers that rely on restriction point theory and starvation methodology to study the cell cycle? I can only suggest that whatever experimental results are obtained by these experiments are valid experimental results, but that any interpretation of these results in terms of the cell cycle, and G1 phase in particular, must be reevaluated and, sadly, discarded.
In short, the acceptance of the restriction point and related G1 phase arrest points is due to the acceptance of a general belief system regarding the cell cycle. Many experiments do not actually distinguish between the restriction point belief system and the alternative view of the cell cycle. The arguments presented here demonstrate that it is important to rethink and revisit the restriction point and other arrest points to see whether these points actually exist.
| ACKNOWLEDGMENTS |
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| REFERENCES |
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