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Full-length version of this article is also available, published online June 21, 2002 as doi:10.1096/fj.02-0018fje.
Published as doi: 10.1096/fj.02-0018fje.
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(The FASEB Journal. 2002;16:1331-1333.)
© 2002 FASEB

A novel rat gene encoding a Humanin-like peptide endowed with broad neuroprotective activity 1

ANDREA CARICASOLE*2, VALERIA BRUNO{dagger}, IRENE CAPPUCCIO*, DANIELA MELCHIORRI*, AGATA COPANI§ and FERDINANDO NICOLETTI*,{dagger}

* Department of Human Physiology and Pharmacology, University of Rome ‘La Sapienza’, 00185, Rome;
{dagger} I.N.M. Neuromed, Pozzilli; and
§ Department of Pharmaceutical Sciences, University of Catania, Italy

2Correspondence: Institute of Human Physiology and Pharmacology ‘Vittorio Erspamer’, University of Rome ‘La Sapienza’, Piazzale Aldo Moro 5, 00185 Rome, Italy. E-mail: andrea.caricasole{at}uniroma1.it

SPECIFIC AIMS

To study the biology of Humanin-related genes in vivo, we identified and cloned a homologue of Humanin in the rat, an animal model widely used for pharmacological studies. The cDNA, which we termed Rattin, encodes a peptide of 38 amino acids (14 residues longer than Humanin). Full-length Rattin and its short 1–24 fragment shared with Humanin the ability to protect neurons against beta-amyloid (Aß) toxicity. However, as opposed to Humanin, Rattin could also display protective activity against excitotoxic neuronal death. Rattin provides the first example of a Humanin-related peptide endowed with a broad neuroprotective activity.

PRINCIPAL FINDINGS

1. Identification and characterization of Rattin
We used the published Humanin DNA sequence to identify homologous rat ESTs, which we assembled to yield a predicted Rattin cDNA of 1591 bp displaying 88% identity to the Humanin cDNA sequence. Upon translation, the predicted Rattin cDNA sequence (Fig. 1 ) yielded an ORF of 38 amino acids (14 residues longer than Humanin) displaying a high degree of similarity (81% identity, 85% homology) to the published Humanin peptide sequence. In silico analysis using NNSSP revealed that the Rattin ORF is predicted to encode a soluble protein, consistent with the soluble nature of Humanin, with a calculated theoretical pI of 9.86 and a mol wt of 4338.11. As previously reported for Humanin, no homology was found between known proteins and Rattin. Secondary structure prediction using GORIV postulated similar overall characteristics for the Rattin and Humanin peptides. Compared to Humanin, the Rattin ORF encodes a peptide displaying a conserved hydrophobic core region GFNCLLLSISEIDL preceded by a conserved amino-terminal sequence MAKR and followed by a more divergent carboxyl-terminal polar region PVKRLESPNKTRRPYGASIY. Therefore, the Rattin peptide differs from its human counterpart in the length of the carboxyl-terminal sequence (20 amino acids, instead of 6) and in the presence of four substitutions (of which one is conservative) in the rest of the molecule. Based on the predicted Rattin cDNA sequence, specific primers were designed and full-length cDNA was amplified by RT-PCR from rat tissues using a proofreading thermostable polymerase. DNA sequencing of the cloned product confirmed the predicted Rattin cDNA sequence. The expression pattern of Rattin was examined in a panel of adult rat tissues by RT-PCR (standard and semiquantitative) and Northern blotting. The results indicate a pattern of expression essentially superimposable to that reported for Humanin, with significant expression in cardiac and skeletal muscles and in CNS, and relatively lower expression in other organs. Some areas within the brain (e.g., the cerebellum) expressed higher Rattin levels than others (such as the hippocampus), in accord with that reported for Humanin.



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Figure 1. Neuroprotective activity of Rattin and Humanin in primary neuronal cultures. A) Amino acid sequences of peptides corresponding to Rattin (RN), a truncated Rattin peptide of the same length as Humanin (RNS) and Humanin (HN). B) Neuroprotective activity of RN, RNS, and HN against neuronal cell death induced by Aß 25–35 in pure cultures of rat cortical neurons. Peptides were added at concentrations of 1 µM. C) Neuroprotective activity of RN, RNS, and HN against neuronal cell death induced by ßAP 1–40 in mixed mouse cortical cultures containing both neurons and glial cells. Peptides were added at concentrations of 1 µM. Similar results were obtained when Aß1–40 was added in the presence of MK-801 and DNQX(both at 10 µM, data not shown). Values are means + SE of 4–6 determinations. *P < 0,05 (One-way ANOVA followed by Fischer’s PLSD). None of the peptides affected neuronal viability in the absence of ßAP in the two cell models. Neuronal death was examined by trypan blue staining. Stained neurons were counted from three random fields per well with a phase contrast microscopy at 100–400x.

2. Neuroprotective activity of Rattin
We next tested the neuroprotective properties of Rattin in three in vitro paradigms of neurodegeneration representative of pathologically relevant neurotoxic insults (excitotoxicity, deprivation of trophic support, and ß-amyloid-induced neurodegeneration). Analysis of the predicted Rattin peptide suggested that Rattin and Humanin should present comparable neuroprotective properties, despite their different size. To undertake a comparative approach of the neuroprotective properties of Rattin an Humanin, synthetic peptides corresponding to Rattin, Humanin, or a truncated Rattin peptide lacking the carboxyl-terminal, 14 residue rat-specific domain were used in the studies. In pure cultures of rat cortical neurons challenged with the toxic fragment of Aß (Aß25–35, 25 µM, applied in the presence of ionotropic glutamate receptor antagonists), all three peptides displayed substantial neuroprotection against Aß neurotoxicity at 1-10 µM (Fig. 1B ). To examine whether a protective activity of RNcould still be observed in a more physiological context, we used mouse mixed cortical cultures containing neurons and glial cells. In these experiments, neurotoxicity was induced by the longer fragment Aß 1–40 (25 µM) preincubated in aqueous solution for 1 wk at 37°C to allow the formation of aggregates. Similar to what was observed in pure neuronal cultures, RN, RNS, or HN (all at 1 µM) produced neuroprotection against Aß toxicity in mixed cultures (Fig. 1C ). We next extended the analysis to other paradigms of neuronal degeneration. Excitotoxic neuronal death was examined in mixed cultures of cortical cells challenged with NMDA, a widely used model to assess excitotoxicity. Cultures were challenged with 100 µM NMDA for 10 min and peptides were applied either 16 h before NMDA, then removed after the toxic pulse (‘preexposure’), or during the 20 h after the pulse (‘postexposure’). Under both conditions, both RN and RNS produced substantial neuroprotection whereas HN was virtually inactive (Fig. 1A ). Apoptosis by trophic deprivation was instead induced in cultured cerebellar granule cells by switching the growth medium containing 25 mM K+ (K25) into a conditioned medium containing 10 mM K+ (K10). The conditioned medium was collected from sister cultures grown in K10 since the time of plating. Apoptosis developed within 48 h after switching the medium, as assessed by Hoechst staining (% of apoptotic neurons: K25 cultures = 6.4 ± 3.8; cultures switched from K25 into K10 = 42 ± 5.3; n=6). No protection was induced by RN, RNS, or HN (1 µM) against ‘low- K+’-induced apoptosis of cultured cerebellar granule cells (Fig. 2 B).



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Figure 2. Activity of Humanin-related peptides in neuronal degeneration models mediated by excitotoxicity and trophic deprivation. A) Neuroprotective activity of RN, RNS, and HN against neuronal cell death induced by NMDA treatment in mixed cortical cultures containing neurons and glial cells. RN, RNS, or HN (all at 1 µM) were applied either 16 h before NMDA, then removed after the toxic pulse preexposure) or during the 20 h after the pulse (postexposure). Values are means + SE of 6 determinations. *P < 0.05 vs the respective values obtained with NMDA alone (one-way ANOVA followed by Fisher’s PLSD). Neuronal death was examined by trypan blue staining. Stained neurons were counted from three random fields per well with a phase contrast microscopy at 100–400x. B) Analysis of the neuroprotective activity of RN, RNS, and HN (1 µM) against neuronal cell death induced by potassium deprivation in cultured cerebellar granule neurons. Apoptotic death was quantified after staining the cultures with the fluorescent chromatin dye Hoechst 33258 (0.4 µg/ml). K25 CTRL = control cultures grown in K25 containing medium; K10 = cultures in which the K25 containing medium was switched into a K10 medium. Peptides were added immediately after switching the medium. Values are means + SE of 4 determinations.

CONCLUSIONS AND SIGNIFICANCE

Humanin was recently identified as a novel endogenous, secreted peptide capable of selectively protecting neurons against ßAP and Familial Alzheimer’s disease mutations. To permit pharmacological studies of Humanin gene expression, we have cloned and identified a homologous gene in the rat. The high degree of sequence homology between Rattin and Humanin and the comparable expression profile are consistent with Rattin being a Humanin-related peptide. However, an important difference exists in the spectrum of neuroprotection displayed by these two peptides, with only Rattin being able to protect neurons against excitotoxic death. This is a relevant finding because excitotoxic neuronal death is implicated in a variety of CNS disorders including stroke, head trauma, amyotrophic lateral sclerosis, and Huntington’s chorea. The data presented in the present report should aid the development of novel neuroprotective strategies aimed at modulating the expression of endogenous neuroprotective factors.



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Figure 3. Schematic diagram of the isolation and characterization of Rattin. Starting from the Humanin cDNA sequence, a group of homologous rat ESTs was identified and assembled into a contig, representing the predicted Rattin cDNA sequence. Experimental validation and physical cloning of the Rattin cDNA was followed by a comparative functional analysis of the neuroprotective properties of Rattin and Humanin in different primary neuronal cultures. Whereas both Humanin and Rattin can protect pure cortical neurons against Aß-mediated cell death, only Rattin can protect pure cortical neurons or mixed cortical cultures against excitotoxic cell death.

FOOTNOTES

1 To read the full text of this article, go to http://www.fasebj.org/cgi/doi/10.1096/fj.02-0018fje; to cite this article, use FASEB J. (June 21, 2002) 10.1096/fj.02-0018fje





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