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a CRC Laboratories, Department of Pathology, University Medical School, Edinburgh EH8 9AG, Scotland
| ABSTRACT |
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Key Words: liver cell cycle apoptosis UV irradiation cell proliferation
| INTRODUCTION |
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The IRF-1 tumor suppressor protein is a transcription factor that mediates many of the growth suppressive effects of type 1 interferon through transactivation of genes including p21WAF1, cyclin D1, and double-stranded RNA-dependent protein kinase (13). The involvement of IRF-1 in regulating responses to DNA damage has only recently been recognized (4, 5): IRF-1 regulates a p53-independent pathway triggering apoptosis in mitogen-activated T lymphocytes and Ha-ras-transformed fibroblasts (4). Furthermore, effective cell cycle arrest by embryo fibroblasts after DNA damage required both IRF-1 and p53, cooperating to activate expression of p21WAF1 (6). Thus, IRF-1 has both overlapping and independent activities with p53 in regulating responses to DNA damage, and there is cell type specificity in the particular requirement for IRF-1 or p53 in these responses. Whether IRF-1 also regulates DNA repair activity, as suggested for p53, has not been reported.
Cellular p53 protein concentration commonly increases after exposure to agents that damage DNA, such as ultraviolet (UV) irradiation; however, the precise downstream responses regulated through p53 in cells sustaining DNA injury may depend on the damage stimulus (7, 8), cell type (9), and differentiation state. p53 activates transcription of a specific set of target genes, including the cyclin-dependent kinase inhibitor p21WAF1, which produces growth arrest (10). The downstream pathways to apoptosis that depend on p53 remain less certain, but both transactivation-dependent and independent mechanisms are described (8). In addition to regulation by p53 of apoptosis and cell cycle arrest in certain cell types, recent reports have suggested that p53 can directly regulate proteins involved in nucleotide excision repair, at least in vitro (1113). However, the issue is not clearly resolved, and there are conflicting data from different systems about the consequences of p53 deficiency for DNA repair (1119).
p53 is commonly defective in human liver carcinoma, a major cause of cancer death; however, the roles of p53 in normal hepatocytes and the regulation of hepatocyte responses to DNA damage are still incompletely understood. We have reported that proliferating hepatocytes show p53-dependent growth arrest after DNA damage in vivo and in primary culture (20). However, hepatocyte apoptosis after exposure to UV irradiation was p53 independent (20), suggesting that another gene such as IRF-1 may regulate DNA damage-triggered apoptosis in this cell type.
The work presented here sought to better define the responses of hepatocytes to DNA injury. Specifically, we have used primary hepatocytes from IRF-1-deficient mice to test whether IRF-1 is important in hepatocyte responses to DNA damage and whether IRF-1 deficiency affects p53 responses. We have also extended our previous work on the role of p53 in hepatocytes to evaluate a possible role for p53 in regulation of DNA repair. We report for the first time the effects of IRF-1 deficiency on hepatocyte p53 induction and transactivation, cell cycle arrest, and DNA repair compared with both wild-type and p53-null primary hepatocytes.
| MATERIALS AND METHODS |
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Cell proliferation
Monolayer primary cultures of hepatocytes on chamber slides (Lab Teck) were cultured with 40 µM BrdU for 6 h before fixing in 70% ethanol at 4°C. The fixed cultures were treated with 5 M HCl for 1 h before immunocytochemistry to identify BrdU incorporation into nuclei, using a standard indirect peroxidase technique. The primary antibody was a purified monoclonal rat anti-BrdU IgG2a (Sera Labs, Sussex, U.K.), and the secondary was a horseradish peroxidase-conjugated rabbit anti-rat IgG (Sigma, St. Louis, Mo.). Negative controls omitted the primary antibody. For evaluation of BrdU positivity, 500 hepatocytes were counted (sufficient to achieve a running mean), and the number of BrdU positive cells expressed as a percentage of cells were counted.
Evaluation of apoptosis
Twenty-four hours after plating, hepatocyte monolayers were irradiated with 0, 15, or 50 J/m2, and at various times after treatment (24, 48, 72, 96, 120 h) fixed in acid methanol/formalin. After Feulgen staining and a light green counterstain, apoptotic cells were counted under light microscopy. Five hundred hepatocytes were evaluated on cultured monolayers for each observation.
p53 immunocytochemistry
Immunocytochemistry for p53 protein was performed on acetone:methanol (1:1 v/v) -fixed primary hepatocyte monolayers on chamber slides (Lab Teck) and stored dry at -80°C. Cells were fixed at various times after 10J/m2 UV irradiation (performed 24 h after plating, using a Spectrolinker XL1500 (Spectronics Corporation, Westbury, N.Y.). Immunoreactive p53 was labeled by a standard avidin-biotin peroxidase technique using a primary monoclonal anti-p53 antibody pAB 421 (Oncogene Science, Cambridge, U.K.; 1/1000 dilution), as previously described (23).
p53 reporter plasmid
Primary hepatocytes were cultured for 48 h on fibronectin-coated 24-well plates, then transfected with either a p53 reporter plasmid, pRGC
FosLacZ (which contains two copies of an RCG p53-specific binding site placed upstream of a nonfunctional fos promoter and a lacZ gene), or a negative control plasmid, p
FosLacZ, which lacks the RGC p53 binding site (both plasmids were a kind gift from Prof. S. Friend). Transfections were performed using lipofectin (Gibco-BRL, Paisley, U.K.), as previously described (23). Briefly, plasmid DNA (1 µg) and lipofectin (6 µg), each diluted in culture medium (200 and 100 µl respectively), were incubated for 45 min at room temperature. Plasmid and lipofectin were then mixed and further incubated for 45 min before laying the complex over the cells. After 6 h of incubation at 37°C, the DNA-containing medium was replaced by fresh medium. Twenty-four hours after transfection, cells were UV-C irradiated or not, cultured for another 3, 6, 9, or 14 h, and then lysed in 100 µl of reporter lysis buffer (Promega, Southampton, U.K.). ß-Galactosidase activity was determined by using an ONPG substrate assay (Promega ß-galactosidase enzyme assay) and is expressed relative to the amount of protein (Biorad protein assay) recovered from each well, as previously described (23).
Unscheduled DNA synthesis
Primary hepatocytes were cultured on fibronectin-treated chamber slides (Lab Teck) for 24 h, then irradiated with the indicated doses of UV-C and incubated for a further 3 h in medium supplemented with 10 µCi/ml of tritiated thymidine. The radioactive medium was removed and cells were incubated in fresh medium containing 1 mM of nonradioactive thymidine for another hour. The cultures were then fixed in Boum's fixative, Feulgen-counterstained, then dipped in LM-1 autoradiographic emulsion (Amersham, Slough, U.K.) as recommended by the manufacturer. The slides were placed in a sealed box in a refrigerator for 7 days. Processing was performed according to the manufacturer's protocol, using solutions at 13°C and a developing time of 3 min.
Nuclear grain counting was performed on autoradiographed cultures using an image analysis system (Kontron V2.0), and two to four replicate cultures were evaluated for each data point given. For each culture, 10 high-power (x400) fields were assessed, each field containing 20 to 40 nuclei. The num~ber of grains within nuclei was corrected for background (nonnuclear) grain density by subtraction; the results represent the mean (±95% confidence limit) of nuclear grain density for all replicate cultures.
Reactivation of a UV-C irradiated reporter plasmid
The pOP13 CAT reporter plasmid (Stratagen, Cambridge, U.K.) was treated with UV-C at various doses and then cotransfected with unirradiated pßCMV (1:1 ratio) into primary hepatocytes as described above. Twenty-four hours after transfection, the cells were lysed in reporter lysis buffer (Promega).
The CAT activity in transfected cells was measured by liquid scintillation counting assay. Briefly, 30 µl of extract was incubated for 1 h in the presence of [3H]chloramphenicol and n-butyryl coenzyme A in 0.25 M Tris-HCl, pH 8.0. Extraction was performed using 300 µl of mixed xylenes, and for maximum sensitivity back-extracted once after addition of 100 µl of Tris-HCl, pH 8.0. The xylene phase was then transferred into a scintillation vial and counted.
The results for each lysate were corrected for the transfection efficiency, given by the ß-galactosidase activity resulting from the undamaged pCMVß expression (Promega assay) per µg of protein (Biorad protein assay). Reactivation of CAT activity from the irradiated plasmid was calculated by using the average of the activity obtained for n independent transfections relative to the average of activity for an undamaged transfected plasmid.
| RESULTS |
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Apoptosis after UV damage is IRF-1 independent in primary hepatocytes
We have shown that primary hepatocytes undergo apoptosis after UV injury in a dose-dependent manner. No significant increase in apoptosis was detected in either wild-type or IRF-1 null primary hepatocytes treated with 15 J/m2 UV, the level remaining around 5%, as observed in untreated cells. UV irradiation at a higher dose (50 J/m2) produced in both wild-type and IRF-1 null hepatocytes a wave of apoptosis starting 48 to 72 h (20%) and peaking around 96 h after irradiation (5060%). There was no significant difference between genotypes in the apoptotic responses to UV-C.
IRF-1 deficiency affects DNA repair in primary hepatocytes
DNA repair by hepatocytes was assessed in two ways. 1) Host reactivation of a transfected, damaged plasmid (HCR); this assay measures the repair capacity of cells that are not themselves exposed to a genotoxic agent. 2) The quantification of unscheduled DNA synthesis (UDS); this assay measures repair synthesis after whole cell irradiation.
We compared the ability of IRF-1-null, wild-type, and p53-deficient hepatocytes to repair a reporter plasmid damaged by various doses of UV-C. As expected, a UV dose-related impairment of the recovery of the reporter function was shown by all genotypes (
Fig. 2).
However, recovery of the reporter activity by IRF-1 null hepatocytes was significantly lower than that of wild-type and p53-null cells, which were not significantly different from each other, suggesting a role for IRF-1 in this type of DNA repair.
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Unscheduled DNA synthesis was measured by image analysis of nuclear grain density after autoradiography of cultures that had been treated with different doses of UV, then allowed to incorporate tritiated thymidine. After UV irradiation, grain density was increased in hepatocyte nuclei regardless of genotype, showing that the cells were initiating UDS. However, the level of UDS was significantly lower in IRF-1 null hepatocytes than that in wild-type cells (
Fig. 3a),
in keeping with the results obtained for the host reactivation assay. p53 null hepatocytes also showed a reduced level of UDS after UV irradiation compared with wild-type (
Fig. 3b), to a level similar to that shown by IRF-1 null cells (
Fig. 3c).
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IRF-1 deficiency affects p53 protein level and activity
Nonirradiated cultures of both genotypes showed a low prevalence of weak nuclear p53 immunopositivity (58% of cells). The proportion of immunopositive cells did not change with time in culture for either genotype (3 days); however, the intensity of positive nuclear staining was increased noticeably in the IRF-1 null cultures compared with wild-type.
After UV treatment (10J/m2, 254 nm), strong p53 immunopositivity developed in up to 70% of hepatocytes for both genotypes; however, the increase in p53 immunopositivity was more rapid and was sustained longer in IRF-1 null hepatocytes compared with wild-type (
Fig. 4a)
: 60% of IRF-1-deficient hepatocytes were p53 immunopositive within 35 h after UV irradiation, and 20 h later, 40% of the cells had sustained positivity; by contrast, in wild-type hepatocytes, there was a significant increase in the proportion of p53 immunopositive cells by only 6 h after UV treatment, with a sharp peak 12 h after UV, already declining by 24 h.
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To test whether differences between genotypes in p53 immunopositivity were correlated with differences in p53 function, p53 transcriptional activity was studied in the primary hepatocytes, using a transiently transfected p53 reporter plasmid, pRGC
FosLacZ. Unexpectedly, unirradiated IRF-1 null transfectants showed a high level of p53 reporter activity, indicating the presence of transcriptionally active p53; wild-type transfectants showed no evidence of significant p53 reporter activity (i.e., comparable with transfectants carrying the negative control plasmid). p53 reporter activity in the IRF-1 null hepatocytes was three- to sixfold greater than comparable wild-type transfectants between 27 and 39 h after transfection (
Fig. 4b). This observation is in keeping with the increased intensity of p53 immunostaining observed in the non~transfected cultures, and along with other evidence suggests an increased basal level of physiological p53 activity in IRF-1-deficient hepatocytes compared with wild-type, rather than a response of the IRF-1 null cells to the transfection procedure itself.
When IRF-1 null transfectants carrying the p53 reporter plasmid were UV-irradiated (10 J/m2), there was only a slight relative increase in the reporter activity (data not shown). This is in contrast to findings for UV-irradiated wild-type transfectants, which show a fourfold increase in p53 reporter activity (23). However, as the basal level of reporter activity in IRF-1 null cells was already similar to the maximum seen in the irradiated wild-type cells, the failure to see a further increase after irradiation might simply reflect limitations of the reporter system (i.e., already maximally active).
In summary, IRF-1 deficiency in hepatocytes produces a state of increased basal p53 activity and accelerated, prolonged p53 protein responses to DNA damage.
| DISCUSSION |
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The altered p53 regulation observed in IRF-1-deficient hepatocytes might reflect changes in the p53 phosphorylation state (2427). Such a change could explain the increased basal p53 reporter activity observed without a commensurately increased propor~tion of p53 immunoreactive hepatocytes. Alternatively, the elevated p53 reporter activity in IRF-1-deficient cells could be due to an increased basal level of p53 protein, just below the threshold for immunodetection yet detectable by the reporter assay. After DNA damage, the stabilization of more preexisting molecules would manifest as a quicker conversion to immunopositivity (28), as was indeed observed here after UV treatment. Activation of p53 by DNA damage is a very efficient process: one strand break is sufficient to trigger p53 accumulation (29, 30). Hence, the increased p53 activity in IRF-1 null hepatocytes may be caused by unrepaired DNA lesions induced by either endogenous genotoxins or DNA-damaging treatments (UV).
We have reported that when apoptosis is triggered in hepatocytes after UV injury, it is p53 independent, although p53 is stabilized and activated by the injury (8, 20). IRF-1 seemed a reasonable candidate gene to regulate such apoptosis, given its role in p53-independent apoptosis of activated T lymphocytes after
-irradiation (4). We are now able to exclude such a role in UV-injured hepatocytes. Conversely, the failure of UV-injured IRF-1 null hepatocytes to show a significant increase in apoptosis compared with wild-type, despite accelerated, prolonged stabilization of p53, lends further support to the hypothesis that a p53-dependent pathway to apoptosis after DNA damage is not enabled in hepatocytes, regardless of the concentration or timing of p53 protein changes that have been suggested to determine whether a cell undergoes p53-dependent growth arrest or apoptosis (31).
The relationships between growth arrest, apoptosis, and DNA repair in cells sustaining DNA damage are poorly defined, yet of fundamental importance to understanding the mechanisms underlying the suppression of carcinogenesis. The repair data presented here suggest a novel and intriguing link between cytokines and DNA repair regulation through IRF-1, and also support reports that p53 can regulate repair. The discrepancies between the HCR and UDS assays are suggestive: HCR predominantly reflects transcription-coupled repair, whereas UDS is a measure of global repair. Thus, our results in hepatocytes suggest that p53 is required for a normal level of global repair but not for transcription-coupled repair. This observation agrees with findings in Li-Fraumeni skin fibroblasts (15), but differs from reports on other cell types (16, 18). Indeed, there is no clear consensus as to whether p53 regulates DNA repair, perhaps reflecting variability between cell types (1119). By contrast, the IRF-1 null cells are deficient in both global and transcription-coupled repair, as measured here, despite remaining competent to produce a relatively high level of functional p53 as indicated by the reporter assay. It seems probable therefore that any effects of IRF-1 on repair are not acting through p53.
Nevertheless, cooperation between these genes to affect a common target gene such as p21, itself a possible repair regulator (3236), remains a possibility. The decreased ability of IRF-1 null hepatocytes to repair DNA damage might explain the persistently increased p53 immunopositivity after UV treatment compared with wild-type. Similar observations have been made in DNA repair-deficient XP, CS, and TTD fibroblasts, in which the p53 protein level remains high for days (28, 37). Indeed, in normal cells, p53 stabilization shows dose-dependent kinetics (28) and hepatocytes of mice lacking the DNA repair gene ERCC1 have a high level of cellular p53 (38), suggesting that the concentration of p53 is influenced by the level and persistence of genomic DNA damage.
In conclusion, the present results show intriguing links between IRF-1 and p53, but also reveal independent functions in different responses to DNA damage. Dysregulation of IRF-1 in hepatocytes, either directly or through cytokine signaling in diseased liver, may reduce cellular capacity to repair DNA damage and alter the sensitivity of cells to DNA damage thus favoring selection pressure toward the outgrowth of potentially neoplastic clones of cells. In the presence of wild-type p53, such hepatocytes are likely to remain growth arrested; however, in hepatocytes lacking fully functional p53 (such as in chronic hepatitis B infection or with aflatoxin-induced mutation), the consequences of defective or suppressed IRF-1 for reduced DNA repair and hence accumulation of significant mutations may become significant.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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2 Abbreviations: UV, ultraviolet; UDS, unscheduled DNA synthesis; HCR, host cell reactivation; CAT, chloramphenicol acethyl transferase; BrdU, 5-bromo-2'-deoxyuridine. ![]()
Received for publication August 20, 1997. Accepted for publication October 27, 1997.
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