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RESEARCH COMMUNICATION |
a Department of General and Experimental Pathology, University of Vienna, Austria
b Department of Organic Chemistry, University of Vienna, Austria
c Institute of Immunology and Allergology, University of Bern, Switzerland
| ABSTRACT |
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Key Words: Bet v 1 allergy phage mimotope oral immunization monoclonal antibodies
| INTRODUCTION |
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The phage display technique is an excellent tool for defining peptide structures that mimic natural epitopes, including conformational B cell epitopes (2428). Phage peptide libraries consist of filamentous phages, displaying random peptides of defined length on their surface; the peptides can be fused to the phage minor coat protein pIII (29, 30) or, at a higher copy number, to the major coat protein pVIII (31). Specific ligands for molecules of interest can be selected from these peptide libraries by biopanning (30, 2426). The ligands, although differing in sequence, often mimic epitopes on the natural antigen, as shown for human ferritin or Bordetella pertussis toxin (27, 28). Furthermore, mimotopes have been shown to effectively induce specific immune responses, as has been shown for a hepatitis B virus surface mimotope (32).
The aim of this study was to use phage-displayed peptide libraries to define ligands mimicking structural epitopes on the allergen Bet v 1 for murine monoclonal antibodies (mAb's) (11). We further aimed to compare the properties of selected phage-displayed peptides and sequence identical synthetic peptides for inhibition of antibodyallergen interactions. The phage displayed peptides were examined for their ability to induce an allergen-specific immune response in mice (12, 13).
| MATERIALS AND METHODS |
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Phage libraries
mAb ligands were selected from random phage libraries expressing linear (`pVIII 9aa') (31) or circular (`pVIII 9aa.Cys') (27) nonapeptides fused to pVIII of the filamentous bacteriophage fd. Libraries were kindly provided by IRBM (Istituto di Ricerche di Biologia Molecolare P. Angeletti SPA, Rome, Italy).
Biopanning
Three rounds of biopanning were performed with decreasing amounts of monoclonal antibodies for coating (1.0, 0.1, 0.01 µg per well). Enzyme-linked immunosorbent assay (ELISA) plates (Nunc, Roskilde, Denmark) were coated with BIP1 or BIP4 mAb's in bicarbonate buffer, pH 8.5, overnight at 4°C in a humid chamber. Wells were blocked with phosphate-buffered saline (PBS) containing 3% (w/v) bovine serum albumin (BSA) for 1 h at 37°C in a humid chamber. 1011 plaque-forming units (pfu) each of freshly prepared wild-type phages of the circular and linear libraries were added together to each well and incubated at 37°C. Unbound phages were removed by washing with Tris-buffered saline (TBS)/0,5% Tween 20. Bound phages were eluted with 0.1 M HCl pH 2.2 containing 1 mg/ml BSA. The eluted phages were immediately neutralized and used for further biopannings.
Amplification and preparation of phages
Escherichia coli XL-1 Blue were grown in SB medium to an OD600=1 and infected with eluted phages after biopanning by incubation for 15 min at room temperature (RT). For titer determination of infected E. coli, aliquots were plated in serial dilutions on LB plates containing carbenicillin (100 µg/ml). The infected XL-1 Blue culture was grown in SB medium containing carbenicillin (50 µg/ml) and tetracycline (10 µg/ml), 2 h at 37°C. After infection with helper phage VCSM13 (1012 pfu/ml), the culture was incubated for an additional 2 h at 37°C. Kanamycin (70 µg/ml) was added and the culture was further incubated at 37°C, overnight. Phages were harvested by precipitation with 4% (w/v) polyethylene glycol 8000, 3% (w/v) NaCl on ice for 30 min. After centrifugation, pellets were resuspended in PBS containing 0.15% casein and again centrifuged. Supernatants were immediately used for biopanning experiments.
Colony screening assay
After each biopanning round, infected E. coli XL-1 Blue were randomly picked from LB/carbenicillin plates, transferred to new LB/carbenicillin plates, and grown overnight at 37°C. LB plates with colonies were incubated with isopropyl-ß-D-thiogalactopyranoside-treated nitrocellulose. Colonies were then transferred with the nitrocellulose to fresh LB/carbenicillin plates and incubated at 30°C overnight. Filters were blocked with 50 mM Tris, 150 mM NaCl, 5 mM MgCl2, 3% (w/v) BSA, pH 8.0, 30 min at RT and incubated with 50 mM Tris, 150 mM NaCl, 5 mM MgCl2 containing 400 µg/ml lysozyme (Sigma, St. Louis, Mo.), 20 U/ml DNAse (Boehringer-Mannheim, Mannheim, Germany) for 1 h at RT. Filters were saturated with PBS containing 0.5% (wt/vol) bovine serum albumin, and 0.5% (vol/vol) Tween 20 for 1 h at RT. Immunoscreenings with antibodies and isotype control antibodies BIP1 or BIP4, respectively, or with BIP3 (directed against 32 to 68 kDa birch pollen allergens) were performed as described in section `SDS-PAGE and immunoblotting'. Clones positive in colony screening assay were reamplified in overnight cultures and stored in 20% glycerol at -70°C.
DNA sequencing
Transfected XL-1 blue bacterial clones positive in the colony screening assay were amplified in overnight cultures. After lysing cells, DNA was isolated by precipitation with polyethylene glycol 8000 (Amresco, Ohio). DNA sequencing was performed by the Sanger dideoxy method using a Thermo Sequenase Cycle Sequencing Kit (Amersham, Little Chalfont, England) with fluorescence-labeled primer 5'-GCT TTA CAC TTT ATG CTT- 3' (MWG Biotechnik, Ebersberg, Germany). Sequencing was performed and analyzed by a LI-COR DNA sequencer 4000L (LI-COR Inc., Lincoln, Nebr.).
Synthetic peptides
Peptides were synthesized by piChem (Graz, Austria) and purified by high-performance liquid chromatography. For BIP1: CFPYCYPSESA (cyclo 15 11-mer); for BIP4: CRQTRTMPGC (cyclo 110 10-mer); for controls, a cyclo 16 11-mer (CHKLRCDKAIA) and a cyclo 110 10-mer (CAISGGYPVC) were synthesized.
ELISA inhibition with purified specific phage clones
ELISA plates (Greiner, Kremsmünster, Austria) were coated with purified BIP1 or BIP4 mAb at a concentration of 1 µg/ml PBS (6 nmol per well) overnight at 4°C, washed with PBS/0,05% (v/v) Tween 20 (PBS/Tween), and saturated with PBS/Tween containing 1% (w/v) BSA for 30 min at RT. Phages were applied in duplicates at 107 pfu/ml PBS/Tween/1% BSA for 3 h at 4°C. As controls, preparations containing identical amounts of phages of the original circular and linear library, helper phage VSCM13, and a nonrelated phage clone from a different series of biopannings were used. A dilution series was prepared with rBet v 1 (Biomay Biotechnik Produktions- und Handels GesmbH, Linz, Austria) in PBS (1 mg/ml0.1 mg/ml) and 1 µl of each dilution was added per 100 µl (corresponding to 60 to 0.06 nmol rBet v 1 per well). As control, recombinant Bet v 2 (profilin) (Biomay Biotechnik Produktions- und Handels GesmbH) was used at identical concentrations. After extensive washing with PBS/Tween, a peroxidase-conjugated sheep anti-M13 phage Ab (Pharmacia, Uppsala, Sweden) was applied for 90 min at RT. The reaction was developed with 2,2'-azino-bis(3-ethylbenzthiazoline) sulfonic acid (Sigma) as substrate. Optical density was measured in an ELISA Reader (Dynatech, Denkendorf, Germany) at 405490 nm.
NMR spectroscopy
The nuclear magnetic resonance (NMR) spectra were recorded at 600.13 MHz (Bruker DRX 600) from approximately 5 mM solutions in DMSO-d6 at 300 K in 5 mm tubes unless indicated otherwise. For the COSY (correlated spectroscopy) experiments (phase-sensitive, double quantum-filtered, coherence selection by pulsed field gradients), standard software as supplied by the manufacturer was used (33).
Oral immunization of Balb/c mice with BIP1-phages
Balb/c mice, 56 wk of age, were used for oral immunization with phages (Biovendor Biotechnology, Brno, Czech Republic). For intragastral administration, 2 x 108 pfu phage were diluted to a volume of 200 µl in PBS and delivered directly to the stomach by a blunt steel feeding tube. Three groups (of four mice each) were given gavages on day 0, 7, 14, and 35 with BIP1-phages, with wild-type phages or PBS. Blood samples from the tail vein were taken on day 0 (preimmune serum) and on day 49.
SDS-PAGE and immunoblotting
Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed with 15% gels under reducing conditions. Blot strips were saturated with PBS containing 0.5% (w/v) BSA, and 0.5% (v/v) Tween 20. Mouse sera (1:250 in blocking buffer) were applied overnight at 4°C. Bound mouse IgG was detected by 125I-labeled sheep anti-mouse IgG (Amersham International Ltd., Amersham, U.K.). Blots were then washed, dried, and exposed to Kodak X-omat film at -70°C.
| RESULTS |
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Colony screening and sequence analysis
The specificity of selected BIP1 or BIP4 phages was further demonstrated by a colony screening assay. Only XL-1 Blue clones expressing the BIP1-specific phage were recognized by BIP1, but not by BIP4 or BIP3 (11). BIP4 clones were exclusively recognized by BIP4, but not by isotype controls. DNA sequencing of positive clones revealed that biopannings with BIP1 mAb favored selection of cyclo (14)- or cyclo (15)-11 mer peptides (
Table 2).
After the third panning, the sequence CFPYCYPSESA was found in 7 of 10 analyzed clones.
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With BIP4, only one positive colony from 112 tested was detected after the third biopanning round (
Table 3).
DNA sequencing of the positive clone showed the insert CRQTRTMPGC, a cyclo (110)-10 mer peptide.
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We compared the sequences of the inserts with the sequence (6) and 3-dimensional structure (9) of the Bet v 1 molecule using the Swiss Pdb Viewer software program (Geneva Biomedical Research Institute, Glaxo Welcome Research and Development SA, Geneva, Switzerland). On the exposed loop between beta-strands 3 and 4, i.e., between aa F58 and Y66 (. . .FPEGFPFKY. . .), we found similarities to the sequence of the BIP1 ligand. However, no alignments were possible for the BIP4 ligand.
Binding of phage ligands to BIP1 or BIP4 inhibited by natural Bet v 1 or rBet v 1 in competitive ELISA
BIP1- and BIP4-specific phage were captured by the respective mAb's in ELISA experiments and detected by a rabbit anti-phage Ab (
Fig. 1).
Maximal reactivity was observed when using 107 phage pfu/ml. This reactivity could be inhibited by addition of rBet v 1 as well as natural Bet v 1 (nBet v 1), representing a mixture of isoforms, in a dose-dependent manner. Incubation of antibodies with phages prior to application of Bet v 1 or the reversed order of application did not influence the pattern of reactivity. At equimolarity of BIP1 mAb with rBet v 1 or with nBet v 1, phage-Ab interactions were abolished. No inhibition was achieved when using recombinant birch profilin (Bet v 2) for control experiments. Moreover, using synthetic oligopeptide mimotopes CFPYCYPSESA for BIP1, or CRQTRTMPGC for BIP4, we were not able to show inhibition in ELISA.
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Using BIP4 as catching Ab a specific and significant reduction of phage-Ab interaction by rBet v 1 and nBet v 1 could be observed (
Fig. 1). However, neither the addition of equimolar doses nor a 10-fold molar excess of rBet v 1 or nBet v 1 was capable of blocking phage/Ab interactions completely.
NMR spectroscopy of synthetic peptides CFPYCYPSESA (BIP1) and CFPYCYPSESA (BIP4)
As judged by their 1H-NMR spectra, the oligopeptides in question were not conformationally homogeneous at 300 K in DMSO-d6 solution. A severe line broadening for some of the amide protons and at least two sets of signals in the aromatic region of the spectrum of BIP1 oligopeptides were observed (
Fig. 2A, B).
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In the case of CFPYCYPSESA (BIP1), two AB systems (Y4 and Y6, 4 protons each) as well as a system of higher order for the monosubstituted aromatic moiety of F2 (5 protons) had to be expected. The corresponding resonances could be found in the region between 6.4 and 7.4 ppm, and the respective connectivities were easily established by means of a COSY experiment. However, in addition to the main component, a second conformation was present according to the small doublets centered at about 6.66 and 6.96 ppm. The 2-dimensional technique mentioned above proved these signals to be connected via scalar couplings and thus to represent the AB system of one of the tyrosine residues of the minor conformation. The resonances of the remaining aromatic signals of the minor component were obscured by those of the major conformation, as could be seen by inspection of the integral values. From a rough estimation, the minor component was present in an amount of approximately 1020% (
Fig. 2A).
The situation was even more obscure with CRQTRTMPGC (BIP4) from an NMR spectroscopic point of view owing to the lack of aromatic signals and the presence of many amino acids containing additional NH and OH groups (R2, R5, Q3, T4, T6). This led to a spectrum completely uninterpretable in terms of amide signal counting. The integral values, however, again indicated the presence of more than one species in solution. To explore the effect of variation of the temperature upon the behavior of CFPYCYPSESA (BIP4), spectra were recorded in the region from 300 to 360 K (
Fig. 2B). The differences observed indicated conformational changes, but the spectra remained complex even at high temperatures and could not be interpreted in a straightforward manner. The fact that the 1H-NMR spectrum of CRQTRTMPGC (BIP4) returned to its original shape after recooling to 300 K also supported the assumption that no defined tertiary structure was present that would most likely be destroyed irreversibly upon heating to 360 K.
Induction of IgG-response to Bet v 1 in Balb/c mice by intragastral administration of BIP1-phages (CFPYCYPSESA)
Two of the four Balb/c mice orally immunized with BIP1-specific phages (CFPYCYPSESA) developed an IgG response to the 17 kDa protein (natural Bet v 1) from birch pollen extract (
Fig. 3,
lane 2). Reactivity was weaker as compared to the binding of mouse IgG raised in Balb/c mice by conventional i.p. immunization with rBet v 1 (
Fig. 3, lane 3). Sera of mice from the wild-type phage or PBS control groups did not show reactivity (data not shown). Assuming a maximum number of 2700 peptide copies per phage, only nanogram quantities of the mimotope were fed to each mouse.
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| DISCUSSION |
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The deduced aa-sequences (CFPYCYPSESA for BIP1; CRQTRTMPGC for BIP4), showed that both mimotopes were derived from the `pVIII 9aa.Cys' library expressing peptides constrained by a disulfide bond (27), and most likely represented discontinuous epitopes. Sequence variations as seen for the peptide selected by BIP1 may occur during the construction of the library (F. Felici, personal communication). Sequence similarities to Bet v 1 were found only for the BIP1 peptide in the area between F58 and Y66, which forms an accessible loop between beta-strands 3 and 4 (9).
Specific inhibition of interactions between mAb's (BIP1 and BIP4) and rBet v 1 or nBet v 1, respectively, was achieved in a dose-dependent manner in ELISA. At equimolar concentration of BIP1 and Bet v 1, the mAb's showed higher affinity to the allergen than to specific phages. However, the number of copies of peptides on the phage surface is not precisely known (Dr. Franco Felici, personal communication), and therefore we could not determine binding affinities. Thus, it seemed reasonable to approach the question by use of synthetic oligopeptides for BIP1 and BIP4. However, sequence identical peptides were unable to inhibit antibodyallergen interactions due to the adoption of different conformations in solution, as shown by NMR spectroscopy. These analyses showed that the oligopeptides were conformationally inhomogeneous. The reason for the internal mobility of peptides CFPYCYPSESA (BIP1) and CRQTRTMPGC (BIP4) obviously resulted from the combination of small cycles that prevent random coil behavior and the presence of proline residues being prone to cis/trans isomerization. Similar situations have long been known in connection with small cyclic peptides (34, 35). The presence of several species of peptides might explain their ineffectiveness in inhibition experiments. Only the peptides together with the phage surface represented perfect mimics of the natural epitope. We conclude that the peptides fused to pVIII might, in connection with the hydrophobic virion surface, adopt a rigid conformation resembling the epitope, thereby enhancing affinities.
Another strong indication for correct mimicking of the Bet v 1 epitopes by the phage-fused peptides was obtained by immunization experiments. Immunizations with phagotypes have been performed previously i.p., leading to an immune response to the natural antigen as has been shown, for example, for a hepatitis B virus antigen (32). Recently the first report on oral administration of phages for immunization was published (36). We could show that intragastric administration of phages expressing only nanogram amounts of a mimotope for Bet v 1 could induce IgG response to the natural allergen in birch pollen extract. This could be achieved without the use of mucosal adjuvants in two of four mice (
Fig. 3). The mechanism of presentation of the peptide fused to the phages from the pVIII 9aa.Cys library remains, however, little understood.
Mimotopes for immunogenic determinants on allergens may therefore be candidates for new therapeutic concepts in allergy. Allergen peptides fused to the phage surface are more stable, and are most likely resistant to the gastrointestinal environment. Moreover, we demonstrate here that phages expressing mimotopes for Bet v 1 are capable of inducing IgG responses to the natural allergen. This suggests a possible application of filamentous phages as vectors for induction of nonanaphylactogenic `blocking antibodies' by oral immunization in humans.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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2 Abbreviations: BSA, bovine serum albumin; COSY, correlated spectroscopy; Ig, immunoglobulin; mAb, monoclonal antibody; Ab, antibody; NMR, nuclear magnetic resonance spectroscopy; rBet v 1, recombinant Bet v 1; nBet v 1, natural Bet v 1; RT, room temperature; ELISA, enzyme-linked immunosorbent assay; IRBM, Istituto di Ricerche di Biologia Molecolare P. Angeletti SPA; PBS, phosphate-buffered saline; pfu, plaque-forming units; SDS-PAGE: sodium dodecyl sulfate-polyacrylamide gel electrophoresis. ![]()
Received for publication June 3, 1998. Accepted for publication July 29, 1998.
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